Easy Breakfast Egg Muffins

5 from 7 votes

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These Breakfast Egg Muffins are a healthy high-protein breakfast. They can easily be made ahead of time and re-heated later on those extra busy mornings!

Breakfast egg muffins on a plate with fruit and tomatoes
Featured with this recipe
  1. What Ingredients Are In Egg Muffins?
  2. Are Egg Muffins Healthy?
  3. How To Store and Re-Heat Egg Muffins
  4. Can You Freeze Egg Muffins?
  5. Tips for Making Egg Muffin Cups
  6. Frequently Asked Questions
  7. More Egg Breakfast Ideas
  8. How To Make Egg Muffins
  9. Easy Breakfast Egg Muffins Recipe

There are SO many reasons to love these muffin tin eggs. They are an easy, keto-friendly, and KID friendly breakfast that can be made in minutes. They are like fluffy little mini egg casseroles that can be individualized to everyone’s liking. Have a picky eater or an allergy in the family? Simply leave those particular ingredients out of one or two cups instead of leaving them out of the whole thing. To make breakfasts even easier, they can also be made ahead of time for quick re-heating later!

Ingredients to make egg muffins

What Ingredients Are In Egg Muffins?

When making egg muffins, we like to use both meat and vegetables. It gives the egg muffins a good, rounded out flavor. Of course you can add or leave out any of the ingredients you would like. For this recipe we use:

  • Steamed spinach – For easy steamed spinach, place fresh spinach in a microwave-safe bowl with 1 tablespoon of water and ¼ teaspoon of salt. Cover the bowl with a plate and put in the microwave for 1 ½ minutes. Squeezed out all the excess water and it’s ready to add to your muffin tin egg muffins
  • Crumbled bacon
  • Shredded cheddar cheese
  • Cherry tomatoes
  • Green onion
Muffin tin with eggs

You Can Also Use…

  • Ham
  • Cooked, crumbled sausage
  • Broccoli
  • Mushrooms
  • Bell pepper
Eggs in a muffin tin topped with cheese, bacon, and green onion ready to be baked

Are Egg Muffins Healthy?

YES! These eggs in a muffin pan are a high-protein, low-carb breakfast that can be adjusted to many different lifestyles or diets. To cut down on calories, you can make egg white muffins by using egg whites only or make them vegetarian-style by using only vegetables as your mix-ins. To make keto egg muffins, you can swap out the milk for cream or water and use bacon, spinach, green onion, and cheese as your mix-ins.

Egg muffins with strawberries and oranges

How To Store and Re-Heat Egg Muffins

To store your breakfast egg muffin cups, simply place the extras in an air-tight container or zip-top bag and store in your refrigerator for up to one week. To re-heat, place in the microwave for 30 seconds. If you are re-heating more than one at a time, you will need to increase the cooking time by about 15 seconds per egg muffin or until heated through.

Egg muffins on a plate with fruit

Can You Freeze Egg Muffins?

I am going to be honest with you here. You CAN freeze these and re-heat for later, however, I don’t like them near as much. The texture changes after freezing and re-heating and they just taste better fresh or even just refrigerated and re-heated. To have the best chance at getting them to freeze and taste good afterwards, wrap them up individually in plastic wrap and then place them in a freezer-safe, air-tight bag or container. To re-heat, allow to thaw in the refrigerator overnight and re-heat in a toaster oven or pop in the microwave for 30 seconds.

Egg muffins in a muffin tin

Tips for Making Egg Muffin Cups

  • Blend the eggs in a blender. This makes your eggs light and airy in just a few seconds without having to whisk or beat them. It gives them the perfect texture.
  • Use a non-stick pan AND spray it with cooking spray. It may seem like you are overdoing it, but you will be happy when the eggs don’t stick to the pan once they are baked. Plus it will make it easier to clean.
  • Don’t overfill with egg – Be sure to leave some room in the cups after pouring the egg so you can add your mix-ins. Some people add the mix ins FIRST and then pour the egg over the top but when I have done that, all the toppings stay at the bottom in one big clump and don’t get distributed throughout the whole egg muffin.
  • Add the toppings in order – I have found by adding the toppings in the order listed in the recipe that I get a nice, even distribution. 

Frequently Asked Questions

How long can egg muffins stay in the fridge?

Place your egg muffins in your favorite airtight containers where they will last for up to a week. And reheating is easy! Just pop in the microwave for 30 seconds. Enjoy!

How do you keep egg muffins from sticking to the pan?

Be sure to use a non-stick pan as well as spray the pan with cooking spray. Although this may seem like overkill, you’ll be glad when the muffins easily slide out of the pan.

Why are my egg muffins rubbery?

They may have been left in the oven too long. Eggs left in the oven for too long will dry out and become rubbery.

READ NEXT: 33+ Super Easy Breakfast Ideas

More Egg Breakfast Ideas

You can never go wrong with eggs for breakfast! Here are some more of our favorite breakfast where eggs are the star of the show:

How To Make Egg Muffins

Egg muffins on a breakfast plate

Easy Breakfast Egg Muffins

5 from 7 votes
These Breakfast Egg Muffins are a healthy high-protein breakfast. They can easily be made ahead of time and re-heated later on those extra busy mornings!
Prep Time 10 minutes
Cook Time 12 minutes
Course Breakfast
Cuisine American
Servings 12 muffins



  • Preheat oven to 350 degrees F.
    Place eggs, milk, and salt in a blender and blend 5-6 seconds or until well blended. You can also whisk the eggs by hand but the eggs might not turn out as fluffy.
  • Spray a non-stick muffin tin with cooking spray, making sure to get each individual cup covered completely. Fill each cup about half full of the egg mixture. You may have a little left over, in that case fill each cup slightly more but don't fill more than 2/3 full.
    beaten eggs in a muffin tin next to a plate of toppings
  • Evenly distribute the spinach, tomatoes, bacon, cheese, and green onion between the cups. Using this order will distribute the toppings evenly in each cup.
    Eggs in a muffin tin topped with cheese, bacon, and green onion ready to be baked
  • Bake in preheated oven for 10-12 mintues or until eggs are puffy and cooked through. It's a good idea to rotate the muffin pan half-way through to ensure even cooking all around.
    Egg muffins in a muffin tin
  • Use a knife or thin spatula to remove muffins from cups. Serve hot.
    Baked egg muffins on a plate


Mix up your egg muffin recipe! 
  • Try different veggies, greens, and herbs. Little bits of broccoli, artichoke hearts, fresh basil, parsley. 
  • Make it dairy-free, or add every cheese under the sun! Some great ones are mozzarella, monterey jack, pepper jack, and parmesan cheese. 

Nutrition Information

Calories: 117kcalCarbohydrates: 1gProtein: 7gFat: 9gSaturated Fat: 4gCholesterol: 136mgSodium: 250mgPotassium: 106mgFiber: 1gSugar: 1gVitamin A: 306IUVitamin C: 2mgCalcium: 62mgIron: 1mg

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About the author

Erica Walker

Erica lives in Boise, Idaho with her husband, Jared, an attorney, and her three beautiful girls. Beyond the world of recipes, she loves adventuring with everything from kayaking, to cruising, to snowboarding and taking the family along for the thrill ride.

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  1. I didn’t even steam the spinach. I just ripped it into tiny pieces and put it right in the egg. It cooked with the egg and was just fine! These are great!

  2. 5 stars
    I love making these & freezing them!! They are perfect for our busy mornings! My kids love customizing what they like in them.

  3. 5 stars
    Our boys absolutely LOVE these!! And I’m so glad they have something for breakfast now that’s not full of sugar!